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SARS-CoV-2 fusion protein low pH 3/3
A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome. -
SARS-CoV-2 fusion protein low pH 2/3
A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome. -
SARS-CoV-2 fusion protein low pH 1/3
A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome. -
Bovine Serum Albumin spc/E at neutral pH 3/3
A simulation of Bovine Serum Albumin [pdbid 3V03] in water (spc/E) with amino acid protonation as to mimic pH 7 at room temperature without counterions. -
Bovine Serum Albumin spc/E at neutral pH 2/3
A simulation of Bovine Serum Albumin [pdbid 3V03] in water (spc/E) with amino acid protonation as to mimic pH 7 at room temperature without counterions. -
Bovine Serum Albumin spc/E at neutral pH 1/3
A simulation of Bovine Serum Albumin [pdbid 3V03] in water (spc/E) with amino acid protonation as to mimic pH 7 at room temperature without counterions. -
Hendra virus fusion protein neutral pH 3/3
A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 7 physiological conditions. -
Hendra virus fusion protein neutral pH 2/3
A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 7 physiological conditions. -
Hendra virus fusion protein neutral pH 1/3
A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 7 physiological conditions. -
Hendra virus fusion protein low pH 3/3
A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome. -
Hendra virus fusion protein low pH 2/3
A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome. -
Hendra virus fusion protein low pH 1/3
A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome. -
D6PC lipid bilayer
A lipid bilayer consisting of 512 D6PC molecules. Initiated from a smaller 128-lipid DLPC equilibrated bilayer with trimmed tails. Pore spontaneously form during the simulation. -
Hen egg-white lysozyme
Hen egg-white lysozyme protein with GROMOS 54A7 in AMBER (replicate 1 of 3). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 1AKI, URL:... -
DLPC lipid bilayer
A lipid bilayer consisting of 512 DLPC molecules. Initiated from a smaller 128-lipid equilibrated bilayer. -
D8PC lipid bilayer
A lipid bilayer consisting of 512 D8PC molecules. Initiated from a smaller 128-lipid DLPC equilibrated bilayer with trimmed tails. Pore spontaneously form during the simulation. -
DEiPC lipid bilayer
A lipid bilayer consisting of 512 DEiPC molecules. Initiated from a smaller 128-lipid equilibrated bilayer. -
POPC lipid bilayer
A lipid bilayer consisting of 512 POPC molecules. Initiated from a smaller 128-lipid equilibrated bilayer. -
DPPC lipid bilayer
A lipid bilayer consisting of 512 DPPC molecules. Initiated from a smaller 128-lipid equilibrated bilayer. -
DOPC lipid bilayer
A lipid bilayer consisting of 512 DOPC molecules. Initiated from a smaller 128-lipid equilibrated bilayer.
