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Thermodynamic integration of ligand 325820 to 325835 in complex with Tyk2 pro...
Thermodynamic integration of ligand 325820 to 325835 (atb molid) in complex with a Tyrosine Kinase 2 (Tyk2) protein [pdbid 4GIH] equilibration at lambda 0 simulated in GROMOS. -
Thermodynamic integration of ligand 325820 to 325822 in complex with Tyk2 pro...
Thermodynamic integration of ligand 325820 to 325822 (atb molid) in complex with a Tyrosine Kinase 2 (Tyk2) protein [pdbid 4GIH] equilibration at lambda 0 simulated in GROMOS. -
Hen egg-white lysozyme
Hen egg-white lysozyme protein with GROMOS 45A4 in GROMOS (replicate 1 of 3). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 1AKI, URL:... -
Hendra virus fusion protein F1/F2 cleavage low pH 3/3
A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome and F1/F2 cleavage. -
Hendra virus fusion protein F1/F2 cleavage low pH 2/3
A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome and F1/F2 cleavage. -
Hendra virus fusion protein F1/F2 cleavage low pH 1/3
A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome and F1/F2 cleavage. -
Bovine Serum Albumin Tip5P at neutral pH 3/3
A simulation of Bovine Serum Albumin [pdbid 3V03] in water (Tip5P) with amino acid protonation as to mimic pH 7 at room temperature without counterions. -
Bovine Serum Albumin Tip5P at neutral pH 2/3
A simulation of Bovine Serum Albumin [pdbid 3V03] in water (Tip5P) with amino acid protonation as to mimic pH 7 at room temperature without counterions. -
SARS-CoV-2 fusion protein neutral pH 3/3
A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with amino acid protonation as to mimic pH 7 (pre-fusion). -
SARS-CoV-2 fusion protein neutral pH 2/3
A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with amino acid protonation as to mimic pH 7 (pre-fusion). -
SARS-CoV-2 fusion protein neutral pH 1/3
A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with amino acid protonation as to mimic pH 7 (pre-fusion). -
SARS-CoV-2 fusion protein low pH 3/3
A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome. -
SARS-CoV-2 fusion protein low pH 2/3
A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome. -
SARS-CoV-2 fusion protein low pH 1/3
A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome. -
Bovine Serum Albumin spc/E at neutral pH 3/3
A simulation of Bovine Serum Albumin [pdbid 3V03] in water (spc/E) with amino acid protonation as to mimic pH 7 at room temperature without counterions. -
Bovine Serum Albumin spc/E at neutral pH 2/3
A simulation of Bovine Serum Albumin [pdbid 3V03] in water (spc/E) with amino acid protonation as to mimic pH 7 at room temperature without counterions. -
Bovine Serum Albumin spc/E at neutral pH 1/3
A simulation of Bovine Serum Albumin [pdbid 3V03] in water (spc/E) with amino acid protonation as to mimic pH 7 at room temperature without counterions. -
Hendra virus fusion protein neutral pH 3/3
A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 7 physiological conditions. -
Hendra virus fusion protein neutral pH 2/3
A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 7 physiological conditions. -
Hendra virus fusion protein neutral pH 1/3
A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 7 physiological conditions.
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